STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M900_2160ABC transporter, ATP-binding protein. (250 aa)    
Predicted Functional Partners:
M900_2161
Hypothetical protein.
 0.999
M900_0462
Hypothetical protein.
 0.997
M900_2159
Hypothetical protein.
 
 0.996
M900_0460
Hypothetical protein.
 
 0.928
EQC44318.1
STAS domain protein.
   
  0.923
M900_1966
ABC transporter, ATP-binding protein.
 
     
0.900
M900_1982
Hypothetical protein.
   
  0.888
M900_2158
Hypothetical protein.
       0.737
M900_1873
ABC transporter, permease protein.
 
      0.699
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.684
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.