STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M900_2374Kinase domain protein. (241 aa)    
Predicted Functional Partners:
M900_2375
Stage II sporulation protein E.
  
 0.906
M900_1001
Response regulator receiver domain protein.
   
 0.873
M900_1719
PAS domain S-box protein.
  
 0.869
EQC47998.1
Hypothetical protein; Identified by glimmer; putative.
   
 0.861
EQC47888.1
GHKL domain protein.
   
 0.856
M900_0911
GHKL domain protein.
   
 0.851
M900_1357
Response regulator receiver domain protein; Overlaps another CDS with the same product name.
    
 0.809
M900_0607
CHASE domain protein.
    
 0.793
M900_1217
CHASE domain protein.
    
 0.793
M900_1447
GHKL domain protein.
    
 0.793
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.