STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M900_2494PhoH family protein. (436 aa)    
Predicted Functional Partners:
M900_2493
Hypothetical protein.
       0.757
M900_2492
Alpha/beta hydrolase, PF05990 family.
       0.641
M900_1040
PF04285 domain protein; Belongs to the UPF0229 family.
   
    0.561
M900_0515
PrkA serine protein kinase.
  
  
 0.552
M900_1039
Putative kinase PrkA.
   
  
 0.534
M900_1041
SpoVR family protein.
   
    0.531
M900_2495
Hypothetical protein.
       0.474
M900_2086
Ribonuclease E/G family protein.
  
    0.444
M900_2491
Methyl-accepting chemotaxis protein signaling domain protein.
       0.442
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.