STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M900_2509Prokaryotic glutathione synthetase, N-terminal domain/glutathione synthetase, ATP-binding domain multi-domain protein. (310 aa)    
Predicted Functional Partners:
gshA
Glutamate--cysteine ligase.
 
  
 0.829
EQC44873.1
Putative glutaredoxin domain protein.
 
  
 0.816
M900_2538
Hypothetical protein.
 
     0.719
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
    
  0.714
grxD
Monothiol glutaredoxin, Grx4 family; Belongs to the glutaredoxin family. Monothiol subfamily.
  
     0.659
M900_2510
Putative aminopeptidase.
       0.642
ggt
Gamma-glutamyltransferase.
 
  
 0.590
M900_2223
Glutathione S-transferase, N-terminal domain protein; Belongs to the GST superfamily.
 
  
 0.549
pepA
Cytosol aminopeptidase family, catalytic domain protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 
 0.530
M900_0625
Cytosol aminopeptidase family, catalytic domain protein; Belongs to the peptidase M17 family.
   
 
 0.530
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
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