STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilvEBranched-chain-amino-acid transaminase. (351 aa)    
Predicted Functional Partners:
ilvA
Threonine ammonia-lyase.
  
 
 0.885
M900_1138
HMGL-like protein.
  
 0.865
M900_1707
Dehydrogenase E1 component.
  
 0.862
M900_2561
Dehydrogenase E1 component.
  
 0.862
M900_2069
Putative 3-deoxy-7-phosphoheptulonate synthase.
    
 0.816
M900_1108
Proline dehydrogenase family protein.
   
 0.802
metC
Cystathionine beta-lyase.
  
 0.801
ldh
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.797
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
     
 0.787
M900_1146
2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit.
    
 0.774
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.