STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufEFe-S metabolism associated domain protein. (143 aa)    
Predicted Functional Partners:
sufS
Cysteine desulfurase, SufS family; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.935
M902_1281
Aminotransferase, class V.
  
 0.911
sufB
FeS assembly protein SufB.
 
 
 0.800
sufD
FeS assembly protein SufD.
 
 
 0.765
hemB
Porphobilinogen synthase; Belongs to the ALAD family.
       0.762
sufC
FeS assembly ATPase SufC.
 
   0.752
M902_3282
Hypothetical protein.
       0.639
M902_3283
CobQ/CobB/MinD/ParA nucleotide binding domain protein.
       0.564
M902_2649
2Fe-2S iron-sulfur cluster-binding domain protein.
     
 0.499
M902_3284
Hypothetical protein.
       0.463
Your Current Organism:
Bacteriovorax sp. BAL6X
NCBI taxonomy Id: 1201290
Other names: B. sp. BAL6_X, Bacteriovorax sp. BAL6_X
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.