STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A357_064Hypothetical protein. (189 aa)    
Predicted Functional Partners:
trmH
Putative RNA methyltransferase, TrmH family.
       0.773
rpsR
Putative ribosomal protein s18.
       0.773
dnaB
Putative replicative DNA helicase.
       0.773
dnaG
Putative DNA primase.
       0.515
rpoD
Putative RNA polymerase sigma factor rpoD.
       0.515
Your Current Organism:
Carsonella ruddii PC NHV
NCBI taxonomy Id: 1202540
Other names: C. Carsonella ruddii PC isolate NHV, Candidatus Carsonella ruddii PC isolate NHV, endosymbiont of Pachypsylla celtidis (sic) solate NHV
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.