STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW17807.1Protein of unknown function. (799 aa)    
Predicted Functional Partners:
SEW17785.1
MoxR-like ATPase.
 
   
 0.961
SEW17794.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
     0.947
SEW17816.1
Translation initiation factor 1 (eIF-1/SUI1); Belongs to the SUI1 family.
       0.741
uvrA
Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
    
  0.738
SEW21488.1
MoxR-like ATPase.
 
   
 0.733
SEV87487.1
MoxR-like ATPase.
 
   
 0.731
SEV83804.1
MoxR-like ATPase.
 
   
 0.720
SEW21470.1
Conserved repeat domain-containing protein.
 
  
 0.658
SEV83834.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
  
 0.645
SEV87406.1
Catalase.
   
   0.624
Your Current Organism:
Halopiger salifodinae
NCBI taxonomy Id: 1202768
Other names: CGMCC 1.12284, H. salifodinae, Halopiger salifodinae Zhang et al. 2013, Halopiger sp. kcy07-b2, JCM 18547, strain KCY07-B2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.