STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000312405_00522Unannotated protein. (211 aa)    
Predicted Functional Partners:
GCA_000312405_00523
Unannotated protein.
      0.904
GCA_000312405_00520
Unannotated protein.
  
 
 0.784
GCA_000312405_00521
Unannotated protein.
  
  0.750
GCA_000312405_00519
Unannotated protein.
       0.723
GCA_000312405_00525
Unannotated protein.
  
    0.718
GCA_000312405_00517
Unannotated protein.
  
    0.709
GCA_000312405_00518
Unannotated protein.
  
    0.705
GCA_000312405_00524
Unannotated protein.
       0.682
IV41_GL000730
Unannotated protein.
     
 0.497
IV41_GL000729
Unannotated protein.
  
  
 0.437
Your Current Organism:
Lactobacillus ingluviei
NCBI taxonomy Id: 1203076
Other names: L. ingluviei str. Autruche 4, Lactobacillus ingluviei Autruche 4, Lactobacillus ingluviei str. Autruche 4, Lactobacillus ingluviei strain Autruche 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.