STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPD78218.1Hypothetical protein. (911 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing) domain-containing protein; Catalyzes the synthesis of GMP from XMP.
   
 
  0.910
EPD78749.1
Hypothetical protein.
  
 0.858
EPD77413.1
Hypothetical protein.
  
 0.858
EPD78744.1
Hypothetical protein.
 
 
   0.813
EPD77457.1
Hypothetical protein.
   
 
 0.792
EPD77879.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
   
 
 0.790
EPD77726.1
Hypothetical protein.
  
 
 0.783
EPD78137.1
Hypothetical protein.
  
  
 0.664
EPD77849.1
Hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
  
  
 0.629
EPD78045.1
Hypothetical protein.
  
  
 0.616
Your Current Organism:
Atopobium sp. F0494
NCBI taxonomy Id: 1203602
Other names: A. sp. oral taxon 199 str. F0494, Atopobium sp. oral taxon 199 str. F0494
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.