STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKB47425.1Hypothetical protein. (267 aa)    
Predicted Functional Partners:
KKB47424.1
Hypothetical protein.
 
     0.947
KKB47421.1
Hypothetical protein.
 
     0.906
KKB47422.1
Hypothetical protein.
 
     0.901
KKB47420.1
TraG family Bacteroides conjugation system ATPase.
 
     0.872
KKB47409.1
Hypothetical protein.
 
     0.774
KKB47416.1
Hypothetical protein.
 
     0.773
KKB54963.1
Hypothetical protein.
 
     0.772
KKB54275.1
Hypothetical protein.
  
     0.771
KKB47426.1
Hypothetical protein.
  
     0.771
KKB54946.1
Hypothetical protein.
  
     0.770
Your Current Organism:
Parabacteroides gordonii
NCBI taxonomy Id: 1203610
Other names: P. gordonii MS-1 = DSM 23371, Parabacteroides gordonii DSM 23371, Parabacteroides gordonii DSM 23371 = MS-1, Parabacteroides gordonii MS-1, Parabacteroides gordonii MS-1 = DSM 23371, Parabacteroides sp. JCM 15724
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.