STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_0214Metal-sensitive transcriptional repressor family protein. (317 aa)    
Predicted Functional Partners:
B005_4263
S-(hydroxymethyl)mycothiol dehydrogenase.
  
  
 0.605
B005_4577
Zinc-binding dehydrogenase family protein.
  
  
 0.605
B005_2424
Copper-translocating P-type ATPase.
 
  
 0.522
cadA
Cadmium-translocating P-type ATPase.
 
  
 0.510
B005_2067
Copper-translocating P-type ATPase.
 
  
 0.495
B005_0213
Hypothetical protein.
       0.490
B005_1519
Esterase family protein.
  
  
 0.485
B005_4410
Esterase family protein.
  
  
 0.485
B005_4962
Prolyl oligopeptidase family protein.
  
  
 0.485
B005_2422
Heavy-metal-associated domain protein.
  
  
 0.482
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.