STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_0278Histidine kinase family protein. (409 aa)    
Predicted Functional Partners:
B005_0277
Bacterial regulatory s, luxR family protein.
 
 
 0.893
B005_2431
Bacterial regulatory s, luxR family protein.
 
 
 0.579
B005_2834
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein.
 
    0.549
B005_0276
Alkylhydroperoxidase AhpD family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
    0.529
B005_2987
Bacterial regulatory s, luxR family protein.
 
 
 0.515
B005_0279
ABC transporter family protein.
  
    0.503
B005_0280
Putative membrane protein.
     
 0.498
B005_2794
Bacterial regulatory s, luxR family protein.
 
 
 0.498
B005_0736
Bacterial regulatory s, luxR family protein.
 
 
 0.496
B005_5320
Bacterial regulatory s, luxR family protein.
 
 0.441
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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