STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_0408SPFH domain / Band 7 family protein. (593 aa)    
Predicted Functional Partners:
B005_0407
SPFH domain / Band 7 family protein.
 
    
0.861
hflB
ATP-dependent metallopeptidase HflB family protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.814
B005_2799
GAF domain protein.
  
     0.626
B005_0410
Putative aTP-dependent protease Clp, ATPase subunit.
  
   0.603
B005_5497
Hypothetical protein.
  
     0.603
B005_1710
Hypothetical protein.
  
     0.579
B005_0409
Hypothetical protein.
       0.572
B005_1911
Hypothetical protein.
  
     0.541
B005_0429
Hypothetical protein.
  
 
 
 0.528
B005_4575
Hypothetical protein.
  
  
 0.500
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.