STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_0450Hypothetical protein. (156 aa)    
Predicted Functional Partners:
B005_0451
ribD C-terminal domain protein.
 
     0.635
B005_4522
Putative sugar epimerase/reductase.
 
     0.596
B005_0681
Short chain dehydrogenase family protein.
 
     0.563
B005_4610
Bacterial regulatory s, tetR family protein.
 
     0.503
B005_4609
NAD dependent epimerase/dehydratase family protein.
 
     0.465
B005_0680
Bacterial regulatory helix-turn-helix s, AraC family protein.
 
     0.459
B005_0452
Acetyltransferase family protein.
       0.439
B005_2434
nmrA-like family protein.
 
     0.434
B005_0156
Putative transcriptional regulator, TetR family protein.
  
     0.416
B005_1935
NAD dependent epimerase/dehydratase family protein.
 
     0.410
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.