B005_0726 protein (Nocardiopsis alba) - STRING interaction network

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Score

B005_0726

Small GTP-binding domain protein. (254 aa)

Predicted Functional Partners:

B005_0725

0.989

truB

0.936

rbfA

0.918

rplB

0.883

rpsE

0.871

rpsK

0.834

rpsB

0.824

rplC

0.818

rpoC

0.816

rpoB

0.810

Your Current Organism:

Nocardiopsis alba

NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B005_0725	B005_0726	B005_0725	B005_0726	Translation-initiation factor 2 family protein.	Small GTP-binding domain protein.	0.989
B005_0725	rbfA	B005_0725	B005_0723	Translation-initiation factor 2 family protein.	Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.	0.942
B005_0725	rplB	B005_0725	B005_2707	Translation-initiation factor 2 family protein.	Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.865
B005_0725	rplC	B005_0725	B005_2704	Translation-initiation factor 2 family protein.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.815
B005_0725	rpoB	B005_0725	B005_2685	Translation-initiation factor 2 family protein.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.796
B005_0725	rpoC	B005_0725	B005_2686	Translation-initiation factor 2 family protein.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.828
B005_0725	rpsB	B005_0725	B005_3102	Translation-initiation factor 2 family protein.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.859
B005_0725	rpsE	B005_0725	B005_2722	Translation-initiation factor 2 family protein.	Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.811
B005_0725	rpsK	B005_0725	B005_2732	Translation-initiation factor 2 family protein.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.786
B005_0725	truB	B005_0725	B005_0722	Translation-initiation factor 2 family protein.	tRNA pseudouridine(55) synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.893
B005_0726	B005_0725	B005_0726	B005_0725	Small GTP-binding domain protein.	Translation-initiation factor 2 family protein.	0.989
B005_0726	rbfA	B005_0726	B005_0723	Small GTP-binding domain protein.	Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.	0.918
B005_0726	rplB	B005_0726	B005_2707	Small GTP-binding domain protein.	Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.883
B005_0726	rplC	B005_0726	B005_2704	Small GTP-binding domain protein.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.818
B005_0726	rpoB	B005_0726	B005_2685	Small GTP-binding domain protein.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.810
B005_0726	rpoC	B005_0726	B005_2686	Small GTP-binding domain protein.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.816
B005_0726	rpsB	B005_0726	B005_3102	Small GTP-binding domain protein.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.824
B005_0726	rpsE	B005_0726	B005_2722	Small GTP-binding domain protein.	Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.871
B005_0726	rpsK	B005_0726	B005_2732	Small GTP-binding domain protein.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.834
B005_0726	truB	B005_0726	B005_0722	Small GTP-binding domain protein.	tRNA pseudouridine(55) synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.936