STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_0817Bacterial transcriptional regulator family protein. (262 aa)    
Predicted Functional Partners:
B005_0248
Bacterial transcriptional regulator family protein.
  
     0.773
B005_0237
Bacterial transcriptional regulator family protein.
  
     0.772
B005_0295
Bacterial transcriptional regulator family protein.
  
     0.764
B005_2507
Bacterial transcriptional regulator family protein.
  
     0.754
B005_3027
Bacterial transcriptional regulator family protein.
  
     0.637
B005_0693
Allophanate hydrolase subunit 1.
  
    0.524
B005_0692
Allophanate hydrolase subunit 2.
  
    0.491
ltaA
L-allo-threonine aldolase.
       0.475
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
     
 0.419
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.