STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_0819MIP channel s family protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (249 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
 
 0.972
B005_0821
FAD binding domain protein.
 
  
 0.824
B005_1187
FAD binding domain protein; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.823
B005_3178
FAD binding domain protein; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.817
B005_1848
Putative transcriptional regulator.
   
 0.652
B005_2279
Cyclic nucleotide-binding domain protein.
   
 0.652
B005_4056
Cyclic nucleotide-binding domain protein.
   
 0.652
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
 
 0.637
B005_0998
EF-hand domain protein.
   
 
 0.600
B005_1759
EF-hand domain protein.
   
 
 0.600
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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