STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_0939Possibl zinc metallo-peptidase family protein. (115 aa)    
Predicted Functional Partners:
B005_5483
Hypothetical protein.
  
     0.755
B005_2980
Cobalamin-independent synthase, Catalytic domain protein.
  
     0.642
B005_0938
Hypothetical protein.
 
     0.602
B005_1962
Hypothetical protein.
  
     0.572
B005_5428
Hypothetical protein.
  
     0.558
rsrA
Mycothiol system anti-sigma-R factor.
  
     0.556
B005_0755
Acetyltransferase family protein.
  
     0.550
B005_1347
Hypothetical protein.
  
     0.458
B005_3738
Hypothetical protein.
  
     0.444
priA
Putative primosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
  
     0.442
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.