STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_1031Glycosyl transferases group 1 family protein. (402 aa)    
Predicted Functional Partners:
B005_1026
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.694
B005_1029
Nucleotide sugar dehydrogenase family protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.694
B005_0933
merR HTH regulatory family protein.
  
     0.682
B005_2550
Hypothetical protein.
  
     0.642
B005_1028
Glycosyl transferases group 1 family protein.
 
     0.641
B005_3822
Chorismate mutase type II family protein.
 
     0.641
B005_1981
Hypothetical protein.
  
     0.600
B005_1896
Sensory box protein.
  
   
 0.580
B005_3004
Glycosyl transferase 2 family protein; Overlaps another CDS with the same product name.
 
     0.574
B005_3609
Hypothetical protein.
  
     0.573
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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