STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_1060CAAX protease self-immunity family protein. (345 aa)    
Predicted Functional Partners:
B005_3408
Flp pilus-assembly TadE/G-like family protein.
  
     0.669
B005_2599
Hypothetical protein.
  
     0.604
B005_3857
Hypothetical protein.
  
     0.591
B005_1062
cobQ/CobB/MinD/ParA nucleotide binding domain protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.583
B005_2953
Hypothetical protein.
  
     0.575
B005_3691
Hypothetical protein.
  
     0.575
B005_3720
Hypothetical protein.
  
     0.575
B005_1061
Hypothetical protein.
       0.567
B005_3609
Hypothetical protein.
  
     0.562
B005_2850
Putative membrane protein.
  
     0.547
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.