B005_1077 protein (Nocardiopsis alba) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

B005_1077

Hypothetical protein. (290 aa)

Predicted Functional Partners:

B005_0377

0.669

lsr2

0.639

B005_2980

0.569

dapE

0.566

B005_0535

0.530

B005_1962

0.522

B005_1076

0.506

B005_0536

0.498

B005_3774

0.488

B005_1343

0.451

Your Current Organism:

Nocardiopsis alba

NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B005_0377	B005_0535	B005_0377	B005_0535	Hypothetical protein.	50S ribosome-binding GTPase family protein; Overlaps another CDS with the same product name.	0.521
B005_0377	B005_0536	B005_0377	B005_0536	Hypothetical protein.	50S ribosome-binding GTPase family protein; Overlaps another CDS with the same product name.	0.459
B005_0377	B005_1077	B005_0377	B005_1077	Hypothetical protein.	Hypothetical protein.	0.669
B005_0377	B005_1343	B005_0377	B005_1343	Hypothetical protein.	Ribosomal L11 methyltransferase family protein; Belongs to the methyltransferase superfamily.	0.636
B005_0377	B005_1962	B005_0377	B005_1962	Hypothetical protein.	Hypothetical protein.	0.588
B005_0377	B005_3774	B005_0377	B005_3774	Hypothetical protein.	Hypothetical protein.	0.716
B005_0377	lsr2	B005_0377	B005_2576	Hypothetical protein.	Protein lsr2.	0.415
B005_0535	B005_0377	B005_0535	B005_0377	50S ribosome-binding GTPase family protein; Overlaps another CDS with the same product name.	Hypothetical protein.	0.521
B005_0535	B005_0536	B005_0535	B005_0536	50S ribosome-binding GTPase family protein; Overlaps another CDS with the same product name.	50S ribosome-binding GTPase family protein; Overlaps another CDS with the same product name.	0.878
B005_0535	B005_1077	B005_0535	B005_1077	50S ribosome-binding GTPase family protein; Overlaps another CDS with the same product name.	Hypothetical protein.	0.530
B005_0535	B005_1962	B005_0535	B005_1962	50S ribosome-binding GTPase family protein; Overlaps another CDS with the same product name.	Hypothetical protein.	0.488
B005_0535	B005_3774	B005_0535	B005_3774	50S ribosome-binding GTPase family protein; Overlaps another CDS with the same product name.	Hypothetical protein.	0.531
B005_0536	B005_0377	B005_0536	B005_0377	50S ribosome-binding GTPase family protein; Overlaps another CDS with the same product name.	Hypothetical protein.	0.459
B005_0536	B005_0535	B005_0536	B005_0535	50S ribosome-binding GTPase family protein; Overlaps another CDS with the same product name.	50S ribosome-binding GTPase family protein; Overlaps another CDS with the same product name.	0.878
B005_0536	B005_1077	B005_0536	B005_1077	50S ribosome-binding GTPase family protein; Overlaps another CDS with the same product name.	Hypothetical protein.	0.498
B005_0536	B005_1962	B005_0536	B005_1962	50S ribosome-binding GTPase family protein; Overlaps another CDS with the same product name.	Hypothetical protein.	0.477
B005_0536	B005_3774	B005_0536	B005_3774	50S ribosome-binding GTPase family protein; Overlaps another CDS with the same product name.	Hypothetical protein.	0.546
B005_1076	B005_1077	B005_1076	B005_1077	Bacterial transferase hexapeptide family protein; Belongs to the transferase hexapeptide repeat family.	Hypothetical protein.	0.506
B005_1076	dapE	B005_1076	B005_1075	Bacterial transferase hexapeptide family protein; Belongs to the transferase hexapeptide repeat family.	Succinyl-diaminopimelate desuccinylase.	0.600
B005_1077	B005_0377	B005_1077	B005_0377	Hypothetical protein.	Hypothetical protein.	0.669