STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_1148DSBA-like thioredoxin domain protein. (259 aa)    
Predicted Functional Partners:
B005_1149
Bacterial regulatory s, tetR family protein.
 
     0.711
B005_0644
DSBA-like thioredoxin domain protein.
  
     0.615
B005_0106
nlpC/P60 family protein.
   
 
 0.486
B005_1271
D-alanyl-D-alanine carboxypeptidase family protein.
   
   0.484
B005_2904
Putative secreted protein.
   
   0.462
B005_2905
Transglycosylase SLT domain protein.
   
   0.462
B005_3167
Hypothetical protein.
   
   0.462
B005_5213
Hypothetical protein.
   
   0.462
B005_1147
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase family protein.
     
 0.457
B005_4978
Thioesterase domain protein.
  
     0.414
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.