STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_1208Hypothetical protein. (203 aa)    
Predicted Functional Partners:
B005_0273
Hypothetical protein.
  
     0.606
B005_1812
Prolyl oligopeptidase family protein.
  
     0.604
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.549
B005_4193
Hypothetical protein.
  
     0.538
B005_4255
Bacterial regulatory s, tetR family protein.
  
     0.445
B005_0323
dinB superfamily protein.
  
     0.427
B005_3936
Protease prsW family protein.
  
     0.427
B005_0954
AMP-binding enzyme family protein.
  
     0.424
B005_1064
Putative sigma E regulatory protein, MucB/RseB.
  
     0.417
B005_4855
NUDIX domain protein.
  
     0.413
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.