STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_1424Putative 2-nitropropane dioxygenase. (345 aa)    
Predicted Functional Partners:
B005_0246
Major Facilitator Superfamily protein.
  
 
 0.909
B005_2413
Putative nitrate/nitrite transporter narK2.
  
 
 0.909
narI
Respiratory nitrate reductase, gamma subunit.
    
  0.902
B005_2414
Nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.901
narH
Nitrate reductase, beta subunit.
    
  0.901
nirD
Nitrite reductase [NAD(P)H], small subunit.
     
  0.900
B005_0244
Pyridine nucleotide-disulfide oxidoreductase family protein; Nitrite reductase [NAD(P)H], large subunit.
     
  0.900
B005_0245
Molybdopterin dinucleotide binding domain protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
  0.900
B005_3365
Short chain dehydrogenase family protein.
  
 
 0.812
eryA
Erythronolide synthase, modules 3 and 4.
  
 
 0.794
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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