STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_1533Thioredoxin family protein. (103 aa)    
Predicted Functional Partners:
B005_1534
Hypothetical protein.
     
 0.868
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.851
B005_0129
Dihydrolipoyl dehydrogenase.
  
 0.687
B005_1117
FAD binding domain protein.
  
 0.687
B005_1773
Dihydrolipoyl dehydrogenase.
  
 0.687
B005_5058
Pyridine nucleotide-disulfide oxidoreductase family protein.
  
 0.687
trxB
Thioredoxin-disulfide reductase.
  
 
 0.672
B005_1605
Copper/zinc superoxide dismutase family protein.
   
 0.664
msrB
methionine-R-sulfoxide reductase.
   
 0.661
B005_3239
Hypothetical protein; Belongs to the UPF0301 (AlgH) family.
   
 
 0.634
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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