STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_1595Phosphotransferase enzyme family protein. (546 aa)    
Predicted Functional Partners:
B005_1903
Phosphatase 2C family protein.
 
 
 0.825
B005_2806
Phosphatase 2C family protein.
 
 
 0.821
B005_1936
Carbohydrate binding domain protein.
 
 
 0.810
B005_1594
Putative spore-associated protein A.
       0.762
B005_1983
Putative coagulation factor 5/8 type domain protein.
  
     0.728
B005_3770
Kinase domain protein.
  
     0.702
B005_2443
Phosphatase 2C family protein.
 
   0.673
B005_4080
Hypothetical protein.
 
 
 
 0.602
B005_0078
Phosphotransferase enzyme family protein.
 
 
0.520
pknB
Serine/threonine-protein kinase pknB.
 
 
0.520
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.