B005_1716 protein (Nocardiopsis alba) - STRING interaction network

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Score

B005_1716

RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (170 aa)

Predicted Functional Partners:

sigE

0.623

B005_1988

0.441

B005_3610

0.436

rpoC

0.422

rpoB

0.402

Your Current Organism:

Nocardiopsis alba

NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B005_1716	B005_1988	B005_1716	B005_1988	RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	CCA tRNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.	0.441
B005_1716	B005_3610	B005_1716	B005_3610	RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma-70 factor, sigma-E family protein; Belongs to the sigma-70 factor family. ECF subfamily.	0.436
B005_1716	rpoB	B005_1716	B005_2685	RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.402
B005_1716	rpoC	B005_1716	B005_2686	RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.422
B005_1716	sigE	B005_1716	B005_2217	RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.623
B005_1988	B005_1716	B005_1988	B005_1716	CCA tRNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.	RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.441
B005_3610	B005_1716	B005_3610	B005_1716	RNA polymerase sigma-70 factor, sigma-E family protein; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.436
B005_3610	rpoB	B005_3610	B005_2685	RNA polymerase sigma-70 factor, sigma-E family protein; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.402
B005_3610	rpoC	B005_3610	B005_2686	RNA polymerase sigma-70 factor, sigma-E family protein; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.422
rpoB	B005_1716	B005_2685	B005_1716	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.402
rpoB	B005_3610	B005_2685	B005_3610	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-70 factor, sigma-E family protein; Belongs to the sigma-70 factor family. ECF subfamily.	0.402
rpoB	rpoC	B005_2685	B005_2686	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	sigE	B005_2685	B005_2217	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.402
rpoC	B005_1716	B005_2686	B005_1716	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.422
rpoC	B005_3610	B005_2686	B005_3610	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-70 factor, sigma-E family protein; Belongs to the sigma-70 factor family. ECF subfamily.	0.422
rpoC	rpoB	B005_2686	B005_2685	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	sigE	B005_2686	B005_2217	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.422
sigE	B005_1716	B005_2217	B005_1716	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.	0.623
sigE	rpoB	B005_2217	B005_2685	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.402
sigE	rpoC	B005_2217	B005_2686	RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.422