STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_1753Thioredoxin; Belongs to the thioredoxin family. (123 aa)    
Predicted Functional Partners:
trxB
Thioredoxin-disulfide reductase.
 
 
 0.906
B005_1399
Glutaredoxin family protein.
  
  
 0.762
B005_4863
Pyridine nucleotide-disulfide oxidoreductase family protein.
  
 
 0.743
B005_4832
Thioredoxin family protein; Belongs to the thioredoxin family.
  
  
 0.738
sodA
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.665
B005_5058
Pyridine nucleotide-disulfide oxidoreductase family protein.
  
 
 0.561
B005_3281
Putative peroxiredoxin.
  
 
 0.553
B005_3319
Putative low molecular weight protein-tyrosine-phosphatase.
 
 
 0.546
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.519
gap
Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.513
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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