STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_1766Short chain dehydrogenase family protein. (259 aa)    
Predicted Functional Partners:
B005_4790
Short chain dehydrogenase family protein.
  
 
 0.706
B005_2522
Polysaccharide biosynthesis family protein.
  
     0.664
B005_4736
Short chain dehydrogenase family protein.
  
     0.557
B005_1777
Short chain dehydrogenase family protein.
  
 
 0.549
B005_1767
Methyltransferase domain protein.
       0.514
hisE
phosphoribosyl-ATP diphosphatase.
       0.512
dhbA
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase.
  
 
 0.493
B005_3330
Short chain dehydrogenase family protein; P-aminobenzoate N-oxygenase AurF family protein.
  
     0.440
B005_1949
Short chain dehydrogenase family protein.
  
 
 0.414
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.