STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_1826Alpha/beta hydrolase fold family protein. (304 aa)    
Predicted Functional Partners:
B005_1827
Hypothetical protein.
       0.798
B005_3738
Hypothetical protein.
  
     0.661
B005_2409
Dienelactone hydrolase family protein.
  
     0.631
B005_0721
Alpha/beta hydrolase fold family protein.
  
     0.584
B005_1825
Hypothetical protein.
       0.581
B005_3325
Alpha/beta hydrolase fold family protein.
  
     0.544
B005_2266
Alpha/beta hydrolase fold family protein.
  
     0.515
pimA
GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase.
  
    0.486
B005_1742
Alpha/beta hydrolase fold family protein.
  
     0.484
B005_5035
Alpha/beta hydrolase fold family protein.
  
     0.482
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.