STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_1888NAD(P)H quinone oxidoreductase, PIG3 family protein. (324 aa)    
Predicted Functional Partners:
B005_3364
Beta-ketoacyl synthase, C-terminal domain protein.
 
   0.910
B005_2637
Beta-ketoacyl synthase, C-terminal domain protein.
 
   0.909
B005_3365
Short chain dehydrogenase family protein.
 
 
 0.817
B005_2047
Short chain dehydrogenase family protein.
 
 
 0.710
B005_2046
Short chain dehydrogenase family protein.
 
 
 0.587
B005_0615
Beta-ketoacyl synthase, C-terminal domain protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
  
 0.560
B005_1889
Hypothetical protein.
       0.544
B005_1887
cobQ/CobB/MinD/ParA nucleotide binding domain protein.
       0.524
B005_3514
Putative enoyl-CoA hydratase 1.
 
 
 0.430
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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