STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_1895Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein. (192 aa)    
Predicted Functional Partners:
B005_2824
Anti-anti-sigma factor family protein; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.710
B005_2801
Anti-anti-sigma factor family protein; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.691
B005_0514
Stage II sporulation E family protein.
 
 
 0.654
B005_3399
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein.
  
     0.623
B005_1556
thiS family protein.
  
     0.622
B005_2996
Diguanylate cyclase domain protein.
  
 
 0.614
B005_1896
Sensory box protein.
 
   
 0.596
B005_1839
Hypothetical protein.
  
     0.591
B005_1590
Anti-anti-sigma factor family protein; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.577
rsbV
anti-sigma-B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.564
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.