STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_1901FHA domain protein. (252 aa)    
Predicted Functional Partners:
sucA
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
    
 
 0.999
B005_1902
FHA domain protein.
 
   
 0.969
pknB
Serine/threonine-protein kinase pknB.
 
 
 
 0.888
B005_0078
Phosphotransferase enzyme family protein.
 
 
 
 0.849
B005_1936
Carbohydrate binding domain protein.
 
 
 
 0.843
B005_1986
Integral membrane protein MviN.
  
 
 
 0.840
B005_1985
Integral membrane protein MviN.
  
 
 
 0.836
B005_5589
mviN-like family protein.
  
 
 
 0.829
B005_1903
Phosphatase 2C family protein.
 
 
 0.804
B005_1905
Penicillin binding transpeptidase domain protein.
 
   
 0.789
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.