STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_2348Binding--dependent transport system inner membrane component family protein. (302 aa)    
Predicted Functional Partners:
B005_2349
ABC transporter family protein.
  
 0.973
B005_2347
NMT1/THI5 like family protein.
 
  
 0.910
ssuB
ABC transporter family protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
 0.819
B005_3987
ABC transporter family protein.
  
 0.813
B005_3988
Binding--dependent transport system inner membrane component family protein.
  
     0.661
B005_3985
Substrate binding domain of ABC-type glycine betaine transport system family protein.
 
  
 0.597
B005_5075
NMT1/THI5 like family protein.
 
  
 0.592
B005_3986
NMT1-like family protein.
 
  
 0.591
B005_2350
Hypothetical protein.
       0.448
B005_2346
Hypothetical protein.
       0.417
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.