STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
egtEAminotransferase class-V family protein; Probably catalyzes the conversion of hercynylcysteine sulfoxide to ergothioneine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. EgtE subfamily. (400 aa)    
Predicted Functional Partners:
sufS
Cysteine desulfurase, SufS family protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
  
 
0.922
trxB
Thioredoxin-disulfide reductase.
  
 
 0.905
metB
Cystathionine gamma-synthase MetB.
     
 0.904
B005_5501
SUF system FeS assembly protein, NifU family.
 
 
 0.893
sufC
feS assembly ATPase SufC.
 
  
 0.758
sufB
feS assembly protein SufB.
 
 
 0.747
sufD
feS assembly protein SufD.
 
 
 0.714
B005_2395
Sodium Bile acid symporter family protein.
       0.510
B005_1729
endonuclease/Exonuclease/phosphatase family protein.
    
   0.459
sph
Sphingomyelin phosphodiesterase.
    
   0.459
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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