STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_2464Putative glucan endo-1,3-beta-D-glucosidase. (392 aa)    
Predicted Functional Partners:
B005_5537
Concanavalin A-like lectin/glucanases superfamily protein.
  
     0.654
B005_4414
Concanavalin A-like lectin/glucanases superfamily protein.
  
     0.652
B005_2463
Histidine kinase family protein; Response regulator receiver domain protein.
 
     0.648
B005_5531
Concanavalin A-like lectin/glucanases superfamily protein.
  
     0.616
bglF
Beta-1,3-glucanase.
   
 0.540
B005_2293
merR regulatory family protein.
  
     0.534
B005_3679
GDSL-like Lipase/Acylhydrolase family protein.
 
   
 0.531
B005_2111
ftsX-like permease family protein.
  
     0.526
B005_0270
Hypothetical protein.
  
     0.510
B005_3471
Hypothetical protein.
  
     0.506
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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