STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_2483Putative membrane protein. (87 aa)    
Predicted Functional Partners:
egtD
Hypothetical protein; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
   
    0.537
B005_2778
Putative membrane protein; Overlaps another CDS with the same product name.
  
     0.515
B005_2180
Hypothetical protein.
  
     0.488
B005_0812
Hypothetical protein.
  
     0.483
B005_3287
csbD-like family protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.478
B005_4351
Hypothetical protein.
  
     0.471
B005_5150
Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
    0.460
B005_2482
Helix-turn-helix family protein.
       0.455
B005_3751
Hypothetical protein.
  
     0.439
B005_3658
Hypothetical protein.
 
    0.413
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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