STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_2497Hypothetical protein. (243 aa)    
Predicted Functional Partners:
B005_2496
Bacterial regulatory s, tetR family protein.
       0.762
B005_0774
Hypothetical protein.
  
     0.668
pheT
phenylalanine--tRNA ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
 
 0.650
B005_2495
Putative acyl CoA dehydrogenase.
       0.570
B005_2780
N-acetylmuramoyl-L-alanine amidase family protein.
  
     0.557
B005_2498
coA-transferase III family protein; Belongs to the CoA-transferase III family.
 
     0.538
B005_2664
Hypothetical protein.
 
   0.516
B005_2565
Hypothetical protein.
 
   0.496
B005_1271
D-alanyl-D-alanine carboxypeptidase family protein.
 
    0.492
B005_3447
Hypothetical protein.
  
     0.474
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.