STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_2517Flavin reductase like domain protein. (193 aa)    
Predicted Functional Partners:
B005_3274
Flavin reductase like domain protein.
  
     0.773
limB
Limonene 1,2-monooxygenase.
 
  
 0.732
B005_2514
Mandelate racemase / muconate lactonizing enzyme, C-terminal domain protein.
 
     0.585
B005_2515
Alpha/beta hydrolase fold family protein.
       0.528
B005_2519
Carbamoyl-phosphate synthase L chain, ATP binding domain protein.
       0.524
B005_2513
Fumarylacetoacetate (FAA) hydrolase family protein.
       0.523
B005_2516
GH3 auxin-responsive promoter family protein.
       0.523
B005_2521
YCII-related domain protein.
       0.523
B005_2520
Alanine-glyoxylate amino-transferase family protein.
       0.515
B005_2522
Polysaccharide biosynthesis family protein.
       0.436
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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