STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_2525B12 binding domain protein. (140 aa)    
Predicted Functional Partners:
B005_2526
Methylaspartate mutase E chain family protein.
 
 
  0.997
B005_1646
Methylaspartate mutase E chain family protein.
 
 
  0.981
B005_1647
B12 binding domain protein.
  
  
  0.929
B005_4766
glutamate/Leucine/Phenylalanine/Valine dehydrogenase family protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.815
B005_0144
Glutamine synthetase, type I.
     
 0.800
B005_0158
Glutamine synthetase, type I.
     
 0.800
B005_0898
Bacterial NAD-glutamate dehydrogenase family protein.
     
  0.800
purQ
Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]
     
  0.800
glsA
Glutaminase A; Belongs to the glutaminase family.
     
  0.800
B005_2430
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
     
  0.800
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.