STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_2597Cytochrome C assembly family protein. (427 aa)    
Predicted Functional Partners:
B005_2596
resB-like family protein.
 
  
 0.976
B005_2594
ahpC/TSA family protein.
  
  
 0.949
B005_2595
Cytochrome C biogenesis transmembrane region family protein.
 
  
 0.936
B005_0335
resB-like family protein.
 
  
 0.896
B005_0336
Cytochrome C biogenesis transmembrane region family protein.
 
  
 0.731
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
  
 0.638
B005_0241
uroporphyrinogen-III synthase HemD family protein.
 
  
 0.616
B005_0595
Cytochrome C biogenesis transmembrane region family protein.
  
  
 0.604
B005_1476
Cytochrome C biogenesis transmembrane region family protein.
  
  
 0.604
B005_0094
Cytochrome b/b6/petB family protein.
  
  
 0.572
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.