STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_2765Luciferase-like monooxygenase family protein. (336 aa)    
Predicted Functional Partners:
hydA
Dihydropyrimidinase.
 
     0.944
B005_2767
Carbon-nitrogen hydrolase family protein.
 
     0.943
B005_5053
Putative nitroreductase.
  
   
 0.719
cofE
Gamma-glutamyl ligase.
 
  
 0.668
cofD
FO 2-phospho-L-lactate transferase.
 
   
 0.643
B005_5399
Putative F420-dependent oxidoreductase.
  
     0.639
ncs1
NCS1 nucleoside transporter family protein.
 
     0.611
B005_5081
F420-dependent oxidoreductase, G6PDH family protein.
  
     0.579
B005_2347
NMT1/THI5 like family protein.
 
  
 0.570
cofG
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit.
 
  
 0.476
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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