STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_2860Septum formation initiator family protein. (124 aa)    
Predicted Functional Partners:
B005_3800
Cell division FtsQ family protein; Essential cell division protein.
   
 
 0.937
B005_2862
ppx/GppA phosphatase family protein.
  
  
 0.721
B005_2861
Hypothetical protein.
 
     0.669
B005_1347
Hypothetical protein.
  
     0.631
B005_5483
Hypothetical protein.
  
     0.630
B005_1958
Hypothetical protein.
  
     0.601
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
    0.599
B005_1962
Hypothetical protein.
  
     0.595
B005_3805
YGGT family protein.
 
   
 0.543
lsr2
Protein lsr2.
  
     0.523
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.