STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_2882FIST N domain protein. (384 aa)    
Predicted Functional Partners:
B005_3996
Sulfotransferase family protein.
  
     0.687
B005_2937
Hypothetical protein.
  
     0.686
B005_0525
Nuclease-related domain protein.
  
     0.659
B005_2218
Hypothetical protein.
  
     0.659
B005_5241
Hypothetical protein.
  
     0.645
B005_2942
ftsK/SpoIIIE family protein.
  
     0.642
B005_0860
Putative membrane protein.
  
     0.639
B005_1323
Sensory box protein.
  
     0.636
B005_0542
Putative nucleotidyltransferase protein.
  
     0.633
B005_2936
Conjugative transposon TcpC family protein.
  
     0.629
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.