STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_2966Zinc-binding dehydrogenase family protein. (328 aa)    
Predicted Functional Partners:
B005_2962
Peptidase M48 family protein.
       0.773
B005_2963
Type IV secretory system Conjugative DNA transfer family protein.
       0.773
B005_2964
Hypothetical protein.
       0.773
B005_2965
Hypothetical protein.
       0.773
B005_4676
Alcohol dehydrogenase GroES-like domain protein.
  
     0.642
B005_0645
Zinc-binding dehydrogenase family protein.
  
     0.564
B005_5038
Zinc-binding dehydrogenase family protein.
  
     0.484
B005_2960
Zeta toxin family protein.
       0.480
B005_2961
Hypothetical protein.
       0.480
B005_1201
Alcohol dehydrogenase.
  
     0.444
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.