STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_3004Glycosyl transferase 2 family protein; Overlaps another CDS with the same product name. (646 aa)    
Predicted Functional Partners:
B005_3006
Hypothetical protein.
 
   
 0.938
B005_3005
Glycosyl transferase 2 family protein; Overlaps another CDS with the same product name.
     0.928
B005_3003
Putative lipoprotein.
       0.773
B005_4053
Sigma-70, region 4 family protein.
  
   
 0.743
B005_3513
Glycosyl transferase 2 family protein.
 
     0.719
B005_1791
Archaeal ATPase family protein.
  
     0.704
B005_4546
Glycosyl transferase 2 family protein.
   
 0.649
B005_2747
Hypothetical protein.
 
     0.636
B005_1031
Glycosyl transferases group 1 family protein.
 
     0.574
B005_1594
Putative spore-associated protein A.
  
     0.572
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.