STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B005_3026Metallopeptidase M24 family protein. (283 aa)    
Predicted Functional Partners:
B005_3023
Putative metal-dependent hydrolase family protein.
 
     0.785
B005_3024
Short chain dehydrogenase family protein.
 
 
 0.770
B005_0642
RNA ligase.
 
   
 0.690
B005_2592
Hypothetical protein.
  
  
 0.561
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.549
B005_3022
2Fe-2S iron-sulfur cluster binding domain protein.
     
 0.534
B005_3202
Putative membrane protein.
  
     0.503
B005_3027
Bacterial transcriptional regulator family protein.
       0.495
B005_2653
Acceptor oxidoreductase, alpha subunit.
     
 0.476
B005_3021
Bacterial regulatory s, tetR family protein.
 
     0.463
Your Current Organism:
Nocardiopsis alba
NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.