B005_3052 protein (Nocardiopsis alba) - STRING interaction network

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second shell of interactors

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

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Score

B005_3052

Hypothetical protein. (162 aa)

Predicted Functional Partners:

rpmF

0.892

rpsC

0.859

rpmB-2

0.806

rpsR-2

0.791

rplK

0.754

rpsF

0.750

rpsP

0.750

rpsB

0.745

infC

0.743

rplA

0.741

Your Current Organism:

Nocardiopsis alba

NCBI taxonomy Id: 1205910
Other names: N. alba ATCC BAA-2165, Nocardiopsis alba ATCC BAA-2165, Nocardiopsis alba BE74

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B005_3052	infC	B005_3052	B005_0033	Hypothetical protein.	Translation initiation factor IF-3; Belongs to the IF-3 family.	0.743
B005_3052	rplA	B005_3052	B005_2682	Hypothetical protein.	Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.741
B005_3052	rplK	B005_3052	B005_2681	Hypothetical protein.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.754
B005_3052	rpmB-2	B005_3052	B005_3047	Hypothetical protein.	Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.806
B005_3052	rpmF	B005_3052	B005_3053	Hypothetical protein.	Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.892
B005_3052	rpsB	B005_3052	B005_3102	Hypothetical protein.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.745
B005_3052	rpsC	B005_3052	B005_2711	Hypothetical protein.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.859
B005_3052	rpsF	B005_3052	B005_1996	Hypothetical protein.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.750
B005_3052	rpsP	B005_3052	B005_3076	Hypothetical protein.	Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.750
B005_3052	rpsR-2	B005_3052	B005_1997	Hypothetical protein.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.	0.791
infC	B005_3052	B005_0033	B005_3052	Translation initiation factor IF-3; Belongs to the IF-3 family.	Hypothetical protein.	0.743
infC	rplA	B005_0033	B005_2682	Translation initiation factor IF-3; Belongs to the IF-3 family.	Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.916
infC	rplK	B005_0033	B005_2681	Translation initiation factor IF-3; Belongs to the IF-3 family.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.885
infC	rpmB-2	B005_0033	B005_3047	Translation initiation factor IF-3; Belongs to the IF-3 family.	Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.562
infC	rpmF	B005_0033	B005_3053	Translation initiation factor IF-3; Belongs to the IF-3 family.	Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.725
infC	rpsB	B005_0033	B005_3102	Translation initiation factor IF-3; Belongs to the IF-3 family.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.974
infC	rpsC	B005_0033	B005_2711	Translation initiation factor IF-3; Belongs to the IF-3 family.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.957
infC	rpsF	B005_0033	B005_1996	Translation initiation factor IF-3; Belongs to the IF-3 family.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.904
infC	rpsP	B005_0033	B005_3076	Translation initiation factor IF-3; Belongs to the IF-3 family.	Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.877
infC	rpsR-2	B005_0033	B005_1997	Translation initiation factor IF-3; Belongs to the IF-3 family.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit.	0.975