Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| B005_1591 | B005_1593 | B005_1591 | B005_1593 | LAO/AO transport system ATPase. | methylmalonyl-CoA mutase family protein. | 0.981 |
| B005_1591 | B005_2846 | B005_1591 | B005_2846 | LAO/AO transport system ATPase. | methylmalonyl-CoA mutase C-terminal domain protein. | 0.809 |
| B005_1591 | B005_3234 | B005_1591 | B005_3234 | LAO/AO transport system ATPase. | methylmalonyl-CoA mutase N-terminal domain protein. | 0.983 |
| B005_1591 | mce | B005_1591 | B005_3228 | LAO/AO transport system ATPase. | methylmalonyl-CoA epimerase. | 0.787 |
| B005_1593 | B005_1591 | B005_1593 | B005_1591 | methylmalonyl-CoA mutase family protein. | LAO/AO transport system ATPase. | 0.981 |
| B005_1593 | B005_2653 | B005_1593 | B005_2653 | methylmalonyl-CoA mutase family protein. | Acceptor oxidoreductase, alpha subunit. | 0.955 |
| B005_1593 | B005_2846 | B005_1593 | B005_2846 | methylmalonyl-CoA mutase family protein. | methylmalonyl-CoA mutase C-terminal domain protein. | 0.798 |
| B005_1593 | B005_3230 | B005_1593 | B005_3230 | methylmalonyl-CoA mutase family protein. | LAO/AO transport system ATPase. | 0.931 |
| B005_1593 | B005_3234 | B005_1593 | B005_3234 | methylmalonyl-CoA mutase family protein. | methylmalonyl-CoA mutase N-terminal domain protein. | 0.999 |
| B005_1593 | B005_4431 | B005_1593 | B005_4431 | methylmalonyl-CoA mutase family protein. | AMP-binding enzyme family protein. | 0.906 |
| B005_1593 | mce | B005_1593 | B005_3228 | methylmalonyl-CoA mutase family protein. | methylmalonyl-CoA epimerase. | 0.983 |
| B005_1593 | pyc | B005_1593 | B005_0351 | methylmalonyl-CoA mutase family protein. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.870 |
| B005_1593 | sucC | B005_1593 | B005_2847 | methylmalonyl-CoA mutase family protein. | succinyl-CoA ligase [ADP-forming] subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.924 |
| B005_1593 | sucD | B005_1593 | B005_2848 | methylmalonyl-CoA mutase family protein. | succinate-CoA ligase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.935 |
| B005_2653 | B005_1593 | B005_2653 | B005_1593 | Acceptor oxidoreductase, alpha subunit. | methylmalonyl-CoA mutase family protein. | 0.955 |
| B005_2653 | B005_2846 | B005_2653 | B005_2846 | Acceptor oxidoreductase, alpha subunit. | methylmalonyl-CoA mutase C-terminal domain protein. | 0.850 |
| B005_2653 | B005_3234 | B005_2653 | B005_3234 | Acceptor oxidoreductase, alpha subunit. | methylmalonyl-CoA mutase N-terminal domain protein. | 0.856 |
| B005_2653 | pyc | B005_2653 | B005_0351 | Acceptor oxidoreductase, alpha subunit. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.951 |
| B005_2653 | sucC | B005_2653 | B005_2847 | Acceptor oxidoreductase, alpha subunit. | succinyl-CoA ligase [ADP-forming] subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.978 |
| B005_2653 | sucD | B005_2653 | B005_2848 | Acceptor oxidoreductase, alpha subunit. | succinate-CoA ligase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.978 |
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